Better-for-you Raspberry Thumbprint Cookies made with almond flour and homemade raspberry chia jam! A lower sugar, soft, perfectly sweet treat that comes together in no time. These are a reader fave done in 30 minutes!

Itty bitty thumbprint cookadees! Have you ever made them?! Do you love them?
I had not. There's a first time for everything. Today we're adding a lusciously fruity holiday cookie (truly an anytime cookie) to our arsenal so my healthy snickerdoodles and healthy monster cookies have a raspberry friend.
I've been enjoying the splendid summer sensation that is the humble frozen raspberry all year long thanks to the freezer aisle. Since the berries are flash frozen at the peak of freshness within hours of harvesting, that divine flavor and nutrition is locked in for life, yo.

Raspberries...oh so good for you!
Once the dietitian in me learned that raspberries have more fiber than any other berry (a whopping 9 grams per cup...OMG) plus 60% of the daily value of immune-boosting vitamin C, I fell even more in love with them than before.
One of my favorite ways as of late to enjoy them is heating a huge handful in a pot with chia seeds and maple syrup for a quick pancake and oatmeal topper.
Did you know red raspberries are among the few plant foods that offer a source of both ellagitannins and anthocyanins? What are those very large and cumbersome words, you ask?

The low down on ingredients
Now lettuce chat about what makes these healthy cookies so divine. I adapted the recipe from my Ginger Snap Cookies, so if you've made those dreamboats, you already know how good this new recipe is destined to be.
- Almond flour: I developed this recipe with almond flour as the base of the dough. You know how much I adore this stuff! Unfortunately there is no sub here because it's so unique in flavor, texture, and fat makeup.
- Coconut oil: Solid coconut oil is the fat of choice here for ideal texture.
- Frozen raspberries: Sweet and tart and delicious for our homemade chia jam. You could also use store-bought raspberry, strawberry, blueberry, or apricot jam to save time!
- Chia seeds: This itty bitty nutrition powerhouses that help us make jam due to their water absorbing abilities. So high in fiber, too!
- Almond and vanilla extract: I love the flavor almond extract adds here! Don't skip it.

The magic's in the chia jam
Now the chia jam is the icing on the cake, my friends. Since the cookies are mini and can't hold a ton of jam, I would literally dip each one in extra jam prior to shoving in my face. There will never be enough raspberry chia jam in this world. Of that I am certain.
Spread her on toast, atop oatmeal, or deliver directly to your face hole with a gob of peanut butter. So. Good.
I made the raspberry chia jam the day before and kept it in the fridge so it would be nice and set and ready to go. It freezes well, too!

Did I mention they're 100% vegan, paleo-friendly, and gluten-free? Happy holidays to us!
PrintHealthy Raspberry Thumbprint Cookies with Almond Flour
- Prep Time: 20 mins
- Cook Time: 11 mins
- Total Time: 31 mins
- Yield: 14 cookies 1x
- Category: Desserts
- Method: Oven
- Cuisine: American
- Diet: Gluten Free
Description
Better-for-you Raspberry Thumbprint Cookies made with almond flour and homemade raspberry chia jam! A lower sugar, soft, perfectly sweet treat that comes together in no time. These are a reader fave done in 30 minutes!
Ingredients
For the raspberry chia jam (can be made ahead of time, you'll have plenty leftover):
- 2 cups frozen raspberries
- 2 tbsp chia seeds
- 3 tbsp pure maple syrup
- ½ tsp vanilla extract
For the cookies:
- 1 tbsp ground flax + 3 tbsp water (can sub 1 large egg)
- 2 cups almond flour
- ⅓ cup coconut sugar (or organic brown sugar/cane sugar)
- ½ tsp baking soda
- ¼ tsp fine sea salt
- 2 tbsp room temperature coconut oil, not melted
- 1 tsp vanilla extract
- 1 tsp almond extract
Instructions
- Preheat oven to 350°F. Line a baking sheet with parchment paper or a Silipat.
- In a medium pot over low heat, stir together raspberries, chia seeds, and maple syrup. Bring to a gentle boil and simmer, uncovered, on low for about 10 minutes (stirring frequently) until it thickens. Remove from heat and stir in vanilla. Pour into a bowl and place in freezer to cool (you can also refrigerate if you're making ahead).
- In a small bowl, stir together flax and water to make a "flax egg." Set aside to gel for 5 minutes.
- Place almond flour, coconut sugar, baking soda, and salt in a large bowl, whisking to combine. (Alternatively, you can blitz everything together in the food processor). Add flax egg, coconut oil, vanilla extract, and almond extract, stirring to combine. You should have a smooth dough that's slightly sticky and easy to form into balls.
- Use a cookie scoop to portion dough into 1 inch balls. Place 2 inches apart on prepared baking sheet and gently flatten cookies with hands (they won't spread much while baking.) Use your thumb to make a small indentation in each cookie. Fill each cookie with ½ tsp chia jam.
- Bake for 11 minutes. Allow cookies to cool on the pan for 10 minutes before transferring to a wire rack to cool completely.
Notes
Adapted from my Ginger Snap Cookies.
You could also use store-bought, raspberry, strawberry, blueberry, or apricot jam!




Terri says
Love these!
Do they need to be refrigerated?
Alexis Joseph, MS, RD says
So glad! Yes, you can leave covered on the counter for a day then I'd refrigerate. Would you mind leaving a star rating next time? It's so helpful for people debating making the recipe 🙂 thrilled you love these, Terri!
Brian says
Do you know if these will freeze well? I'm thinking of freezing these first before I ship them across the country for a sick friend. I'm about to make these & I'm sure they're going to be delicious but I'll rate it in advance by the minimal & simple pantry ingredients. Thank you.
Alexis Joseph, MS, RD says
Hey there, that’s so sweet! Yes, they’ll freeze great 🙂 let me know how you like them!
Egle says
Keep making this recipe for many years now 😀 so easy, tasty, kids always ask for these. I use store bought strawberry jam, saves so much time.
Thank you for the recipe!!
Alexis Joseph, MS, RD says
Awww you made my day!! Thanks Egle!
PAT says
GREAT RECIPE WILL MAKE FOR HOLIDAYS
THANK YOU PAT. BECAUSE YOUR RECIPES
ARE SO GOOD I AM GOING TO GIVE IT A
RATING BEFORE I MAKE THEM.
AM says
These cookies were so delicious and easy to make!
Alexis says
Amazing, thanks Alyssa!!
Lisa Spiegel says
I'm obsessed with this super simple super delicious recipe that is versatile and always perfection. It's especially yummy with mini chocolate chips and orange zest. I've loved the gingerbread spice variation and have filled the thumbprint with date/fig compote. The possibilities are endless - and healthy, delicious, and easy.
Alexis Joseph says
Oh wow, date and fig compote sounds AMAZING! Thanks, Lisa 🙂
Donna says
Love this! However my son has nut allergy so I used GF flour instead. Should have used less. I added addl coconut oil & another egg to bind and they turned out wonderfully. He loved it!
Alexis Joseph says
I'm so glad that worked with such a big change!! Thanks for letting me know, Donna 🙂
Amy says
They’re so good that we are making another batch today!!
Alexis Joseph says
Amazing, thanks so much Amy!!
Amy says
I just made these with my daughters (7 and 5) and we all LOVE them!!! They were super simple and the girls were able to do a lot of the work independently. And they are sooooo good!! We will be making these over and over again!
Alexis Joseph says
I love it!! How fun that they were able to help out 🙂 If you'd be up for leaving a star rating with your comment, that would be so wonderful! that helps people find my recipes 🙂
Leah says
So easy and delicious! Always a hit with everyone 🙂
Alexis Joseph says
Yayyy thank you so much, Leah!! I really appreciate the feedback 🙂
Marlies says
These look delicious! I just bought coconut oil, so it looks like these will have to happen...no excuses!
I am thinking they would be delicious with a little bit of your cranberry orange sauce as the filling! I'll have to give that a try since I am in full cranberry mode right now 🙂
Alexis Joseph says
Heck yes--they would be SO good with that cranberry sauce! Let me know if you try it.
Alexis Joseph says
Thanks, Jan!
Amber says
These cookies are INCREDIBLE. The texture is soft, chewy and moist with a punch of sweetness from the raspberry jam. My entire family is already begging me to whip up another batch!
Alexis Joseph says
Thank you TONS, Amber!
Danielle Sanislow says
I’m going to add nuts? Suggestion of kind and how much? Can’t wait to try! Just made fresh blueberry jam from our picking last weekend.
Congrats on the wedding btw!
Danielle Sanislow says
I added just over 1/2 cup chopped walnuts. Came out delish but a little crumbly. Still delish.
Alexis Joseph says
Pecans or walnuts? You can toast them and maybe do 1/3 chop, chopped?
Viktoriya says
I love raspberries! I just made these and I really liked that they were the perfect sweetness (not too sweet) and the perfect nuttiness. Thank you! I'll be making these again!
Alexis says
Yay!!! I'm so glad! I really want to make a chocolate version soon 🙂
annie says
Omg these look so nutty and rich. I am a frozen fruit freak....I don't know what I would do without them.
Alexis says
Agreed! Thanks for reading 🙂
Casey the College Celiac says
YUM! I'm always a sucker for fruit and cookies!
Rachel @ Health My Lifestyle says
Yaaasss! SO excited to make these! You had me at fiber and phytochemicals <3